SpatialOmicsOverlay

SpatialOmicsOverlay graphs annotations on top of OME-TIFF images for NanoString Technologies GeoMx spatial transcriptomics data.

Key Features:

• OME-TIFF Image Overlay: Plots annotations directly on OME-TIFF images from GeoMx experiments.
• Flexible Annotation Plotting: Supports plotting annotations ranging from tissue segment to gene expression.

Scientific Applications:

• Spatial Transcriptomics Visualization: Enables visualization of spatially resolved transcriptomic data on tissue images.
• Tissue Context Analysis: Links molecular data to histological features for spatial biological interpretation.

Methodology:

Graphs annotations on OME-TIFF images using the NanoString GeoMx Technology platform.