supersigs
supersigs generates SuperSigs (supervised mutational signatures) from single nucleotide variants in the cancer genome.
Key Features:
- Supervised signature learning: Functions allow users to learn supervised mutational signatures from their own data.
- Signature application: Functions allow users to apply learned supervised mutational signatures to new data.
Scientific Applications:
- Cancer genome analysis: Generation of supervised mutational signatures from single nucleotide variants for cancer genome characterization.
Methodology:
The methodology is based on the approach described in Afsari (2021, ELife).
Collections
Details
- License:
- GPL-3.0
- Tool Type:
- command-line tool, library
- Operating Systems:
- Linux, Mac, Windows
- Programming Languages:
- R
- Added:
- 9/1/2026
- Last Updated:
- 9/1/2026
Operations
Publications
Documentation
User manual
https://bioconductor.org/packages/supersigsDownloads
- Source codehttps://tomasettilab.github.io/supersigs/