survtype
survtype identifies patient subtypes from genomic data that are both clinically relevant and biologically meaningful by incorporating survival information.
Key Features:
- Subtype Identification: Discovers groups of samples with distinct molecular and clinical features from genomic data.
- Survival Integration: Associates molecular subtypes with clinical survival data to ensure clinical relevance.
- Biological Relevance: Prioritizes subtypes that are meaningful at both the molecular and clinical levels.
Scientific Applications:
- Patient Stratification: Identifies clinically relevant subtypes of patients based on genomic and survival data.
- Precision Oncology: Supports discovery of molecular subtypes with distinct prognostic outcomes for cancer research.
Methodology:
The package analyzes genomic data in conjunction with clinical survival information to identify subtypes.
Collections
Details
- License:
- Artistic-2.0
- Tool Type:
- command-line tool, library
- Operating Systems:
- Linux, Mac, Windows
- Programming Languages:
- R
- Added:
- 9/1/2026
- Last Updated:
- 9/1/2026
Operations
Publications
Documentation
User manual
https://bioconductor.org/packages/survtype