TrajectoryUtils

TrajectoryUtils implements low-level utilities for single-cell trajectory analysis, primarily intended for re-use inside higher-level packages.

Key Features:

• Cluster-level minimum spanning tree: Provides a function to create a cluster-level minimum spanning tree for trajectory construction.
• Pseudotime inference data structures: Provides data structures to hold pseudotime inference results.

Scientific Applications:

• Single-cell trajectory analysis: Supports pseudotime inference and trajectory reconstruction in single-cell studies.

Methodology:

Cluster-level minimum spanning tree construction for trajectory inference; data structures for storing pseudotime inference results.