Ularcirc

Ularcirc reads in STAR aligned splice junction files and provides visualisation and analysis tools for splicing analysis, enabling assessment of backsplice junctions and forward canonical junctions.

Key Features:

• Backsplice junction analysis: Ularcirc supports analysis of backsplice junctions for circular RNA detection.
• Forward canonical junction analysis: Ularcirc supports analysis of forward canonical junctions for mRNA splicing analysis.
• STAR splice junction file input: Ularcirc reads in STAR aligned splice junction files as its primary input format.

Scientific Applications:

• Circular RNA analysis: Ularcirc enables analysis of back splicing events for circular RNA identification and characterization.
• mRNA splicing analysis: Ularcirc enables analysis of canonical forward splicing events for mRNA isoform assessment.

Methodology:

Ularcirc reads in STAR aligned splice junction files and provides visualisation and analysis tools for splicing analysis.