biojs-io-snipspector

biojs-io-snipspector parses and visualizes biological data snippets using JavaScript within the BioJS framework to support genomic and protein-structure data inspection.


Key Features:

  • JavaScript-based parsing: Parses biological data snippets using JavaScript.
  • Visualization of biological datasets: Generates visual representations of complex datasets including genomic data and protein structure annotations.
  • BioJS component interoperability: Adheres to BioJS component specifications to enable integration with other BioJS components.

Scientific Applications:

  • Genomic research: Supports parsing and visualization of genomic datasets for analysis.
  • Protein structure visualization: Supports visualization of protein structure data and related annotations.
  • Exploratory data inspection: Enables inspection and visualization of complex biological datasets to aid interpretation.

Methodology:

Implements JavaScript-based data parsing and visualization and leverages BioJS standardized components.

Topics

Details

Tool Type:
library
Operating Systems:
Linux, Windows, Mac
Programming Languages:
JavaScript
Added:
1/22/2015
Last Updated:
11/25/2024

Operations

Publications

Gómez J, García LJ, Salazar GA, Villaveces J, Gore S, García A, Martín MJ, Launay G, Alcántara R, del-Toro N, Dumousseau M, Orchard S, Velankar S, Hermjakob H, Zong C, Ping P, Corpas M, Jiménez RC. BioJS: an open source JavaScript framework for biological data visualization. Bioinformatics. 2013;29(8):1103-1104. doi:10.1093/bioinformatics/btt100. PMID:23435069. PMCID:PMC3624812.

Documentation