biojs-io-snipspector
biojs-io-snipspector parses and visualizes biological data snippets using JavaScript within the BioJS framework to support genomic and protein-structure data inspection.
Key Features:
- JavaScript-based parsing: Parses biological data snippets using JavaScript.
- Visualization of biological datasets: Generates visual representations of complex datasets including genomic data and protein structure annotations.
- BioJS component interoperability: Adheres to BioJS component specifications to enable integration with other BioJS components.
Scientific Applications:
- Genomic research: Supports parsing and visualization of genomic datasets for analysis.
- Protein structure visualization: Supports visualization of protein structure data and related annotations.
- Exploratory data inspection: Enables inspection and visualization of complex biological datasets to aid interpretation.
Methodology:
Implements JavaScript-based data parsing and visualization and leverages BioJS standardized components.
Topics
Details
- Tool Type:
- library
- Operating Systems:
- Linux, Windows, Mac
- Programming Languages:
- JavaScript
- Added:
- 1/22/2015
- Last Updated:
- 11/25/2024
Operations
Publications
Gómez J, García LJ, Salazar GA, Villaveces J, Gore S, García A, Martín MJ, Launay G, Alcántara R, del-Toro N, Dumousseau M, Orchard S, Velankar S, Hermjakob H, Zong C, Ping P, Corpas M, Jiménez RC. BioJS: an open source JavaScript framework for biological data visualization. Bioinformatics. 2013;29(8):1103-1104. doi:10.1093/bioinformatics/btt100. PMID:23435069. PMCID:PMC3624812.