biojs-legacy

biojs-legacy preserves BioJS 0.1 visualization components to maintain access to legacy modules used for visualization of genomic sequences, protein structures, and metabolic pathways.


Key Features:

  • Legacy Support: Preserves and exposes BioJS 0.1 visualization components for continued use in biological data visualization.

Scientific Applications:

  • Genomic sequence visualization: Enables use of legacy components to display and explore genomic sequence data.
  • Protein structure visualization: Supports visualization of protein structures using legacy BioJS modules.
  • Metabolic pathway visualization: Supports depiction of metabolic pathways via legacy visualization components.
  • Longitudinal studies: Provides consistent visualization formats useful for longitudinal analyses requiring stable presentation across timepoints.
  • Education: Supplies established visualization examples for teaching bioinformatics concepts.

Methodology:

The provided description does not specify computational methods, algorithms, or implementation details.

Topics

Details

Tool Type:
library
Operating Systems:
Linux, Mac
Programming Languages:
JavaScript
Added:
1/22/2015
Last Updated:
11/25/2024

Operations

Publications

Yachdav G, Goldberg T, Wilzbach S, Dao D, Shih I, Choudhary S, Crouch S, Franz M, García A, García LJ, Grüning BA, Inupakutika D, Sillitoe I, Thanki AS, Vieira B, Villaveces JM, Schneider MV, Lewis S, Pettifer S, Rost B, Corpas M. Anatomy of BioJS, an open source community for the life sciences. eLife. 2015;4. doi:10.7554/elife.07009. PMID:26153621. PMCID:PMC4495654.

PMID: 26153621
PMCID: PMC4495654
Funding: - Engineering and Physical Sciences Research Council (EPSRC): EP/H043160/1

Documentation