biojs-vis-circularnet
biojs-vis-circularnet visualizes biological networks in a circular layout to represent complex interactions such as gene interactions, regulatory pathways, genomic variations, protein–protein interactions, and metabolic pathways.
Key Features:
- Circular Network Visualization: Renders complex biological interactions in a circular layout to facilitate interpretation of network structures.
- Support for Multiple Network Types: Supports visualization of gene interactions, regulatory pathways, genomic variations, protein–protein interactions, and metabolic pathways.
- BioJS Framework Compatibility: Integrates with the BioJS framework to enable compatibility with diverse datasets and interoperation with other visualization components.
Scientific Applications:
- Genomic Data Analysis: Visualizing gene interactions, regulatory pathways, and genomic variations.
- Proteomics and Metabolomics: Mapping protein–protein interactions and metabolic pathways.
- Systems Biology: Integrating multiple biological network types into cohesive network-level representations.
Methodology:
Leverages the BioJS framework to ensure compatibility with diverse datasets and integration with other visualization tools.
Topics
Details
- Tool Type:
- library
- Operating Systems:
- Linux, Mac
- Programming Languages:
- JavaScript
- Added:
- 1/22/2015
- Last Updated:
- 11/25/2024
Operations
Publications
Yachdav G, Goldberg T, Wilzbach S, Dao D, Shih I, Choudhary S, Crouch S, Franz M, García A, García LJ, Grüning BA, Inupakutika D, Sillitoe I, Thanki AS, Vieira B, Villaveces JM, Schneider MV, Lewis S, Pettifer S, Rost B, Corpas M. Anatomy of BioJS, an open source community for the life sciences. eLife. 2015;4. doi:10.7554/elife.07009. PMID:26153621. PMCID:PMC4495654.