biojs-vis-easy_features

biojs-vis-easy_features visualizes genomic features to map genes, regulatory elements, and mutations onto sequences for genomic annotation and interpretation.


Key Features:

  • Genomic feature visualization: Produces visual representations of features aligned to linear nucleotide sequences.
  • Entity support: Displays specific biological entities including genes, regulatory elements, and mutations.
  • Sequence annotation: Annotates sequences with relevant biological features to represent genomic architecture.
  • Visual analysis support: Provides visual outputs intended to aid analysis and interpretation of genetic data.

Scientific Applications:

  • Genomic annotation: Annotating sequences with features to support identification of genomic elements and architecture.
  • Data analysis and interpretation: Using visual representations to assist interpretation and hypothesis generation from genetic datasets.

Methodology:

No computational methods or algorithmic details are specified in the provided description.

Topics

Details

Tool Type:
library
Operating Systems:
Linux, Mac
Programming Languages:
JavaScript
Added:
1/22/2015
Last Updated:
11/25/2024

Operations

Publications

Yachdav G, Goldberg T, Wilzbach S, Dao D, Shih I, Choudhary S, Crouch S, Franz M, García A, García LJ, Grüning BA, Inupakutika D, Sillitoe I, Thanki AS, Vieira B, Villaveces JM, Schneider MV, Lewis S, Pettifer S, Rost B, Corpas M. Anatomy of BioJS, an open source community for the life sciences. eLife. 2015;4. doi:10.7554/elife.07009. PMID:26153621. PMCID:PMC4495654.

PMID: 26153621
PMCID: PMC4495654
Funding: - Engineering and Physical Sciences Research Council (EPSRC): EP/H043160/1

Documentation