biojs-vis-pdbviewer

biojs-vis-pdbviewer visualizes three-dimensional protein structures to support structural analysis and applications in structural biology and drug design.


Key Features:

  • Integration with BioJS 2.0: Implemented as a component compatible with the BioJS 2.0 framework for embedding within BioJS-based workflows.
  • Visualization of protein structures: Renders three-dimensional protein structures for examination of molecular configurations.

Scientific Applications:

  • Structural Biology: Examination of protein three-dimensional conformation to inform hypotheses about function and mechanism.
  • Drug Design and Development: Visualization of target protein structures to aid in identification of binding sites and molecular interaction analysis.
  • Educational Purposes: Use of protein structure visualizations for teaching molecular biology and biochemistry concepts.

Methodology:

Implemented as a BioJS 2.0 component for web-based embedding and visualization of protein structures.

Topics

Details

Tool Type:
library
Operating Systems:
Linux, Mac
Programming Languages:
JavaScript
Added:
1/22/2015
Last Updated:
11/25/2024

Operations

Publications

Yachdav G, Goldberg T, Wilzbach S, Dao D, Shih I, Choudhary S, Crouch S, Franz M, García A, García LJ, Grüning BA, Inupakutika D, Sillitoe I, Thanki AS, Vieira B, Villaveces JM, Schneider MV, Lewis S, Pettifer S, Rost B, Corpas M. Anatomy of BioJS, an open source community for the life sciences. eLife. 2015;4. doi:10.7554/elife.07009. PMID:26153621. PMCID:PMC4495654.

PMID: 26153621
PMCID: PMC4495654
Funding: - Engineering and Physical Sciences Research Council (EPSRC): EP/H043160/1

Documentation