BioLake

BioLake provides a web-based framework for RNA expression analysis focused on prostate cancer biomarker research.

Key Features:

• Custom Data Upload: Supports online analysis for custom data with one-time uploads of up to 500 MB.
• Data Lakehouse Architecture: Adopts data lakehouse architecture for storage scalability and analysis flexibility.
• Reactive Continuous Data Integration: Applies reactive continuous data integration to eliminate most preprocessing steps for built-in datasets.
• TCGA-PRAD Dataset: Includes TCGA-PRAD mRNA expression data as the pre-built-in dataset for prostate cancer research.

Scientific Applications:

• Prostate Cancer Biomarker Research: Facilitates bioinformatic mRNA data analysis for prostate cancer biomarker discovery using TCGA-PRAD data.
• Public and Private Dataset Analysis: Supports web-based bioinformatics data analysis for both public datasets and private datasets.

Methodology:

BioLake uses a data lakehouse architecture for data storage and applies reactive continuous data integration to minimize preprocessing steps.