BioModels Database Converters

BioModels Database Converters convert models between biological modeling formats to enable interoperability and integration of models and datasets for computational and systems biology analyses.


Key Features:

  • Format conversion: Translate models between biological modeling formats to enable reuse across platforms.
  • Interoperability: Facilitate compatibility of model structure and data to support integration across different modeling and analysis systems.
  • EMBL-EBI integration: Enhance data usability and interoperability with EMBL-EBI resources including the European Variation Archive and EMPIAR.

Scientific Applications:

  • Model reuse and exchange: Enable sharing and reuse of models between software platforms and databases for computational biology studies.
  • Cross-dataset integration: Support combining models with datasets from resources such as the European Variation Archive and EMPIAR for integrative analyses.
  • Systems and computational biology: Facilitate analyses that require interoperable models across different modeling frameworks.

Methodology:

Conversion of models between biological modeling formats.

Topics

Collections

Details

Tool Type:
web application
Operating Systems:
Linux, Windows, Mac
Added:
1/29/2015
Last Updated:
8/8/2022

Operations

Publications

Cook CE, Bergman MT, Finn RD, Cochrane G, Birney E, Apweiler R. The European Bioinformatics Institute in 2016: Data growth and integration. Nucleic Acids Research. 2015;44(D1):D20-D26. doi:10.1093/nar/gkv1352. PMID:26673705. PMCID:PMC4702932.

Documentation