BioPETsurv

BioPETsurv evaluates prognostic enrichment biomarkers for time-to-event clinical trials by analyzing biomarker and censored survival data and simulating trial scenarios to inform trial design.


Key Features:

  • Biomarker Evaluation: Analyzes candidate biomarkers alongside potentially censored survival times to assess prognostic enrichment potential for time-to-event endpoints such as patient survival.
  • Trial Planning and Simulation: Simulates clinical trial scenarios matching specified settings to evaluate the effects of prognostic enrichment strategies on trial outcomes.
  • Quantitative Analysis: Estimates trial metrics including sample size, patient screening requirements, total patient screening cost, and per-patient trial expenses to quantify the impact of prognostic enrichment.

Scientific Applications:

  • Oncology trial design: Identifies patients at higher risk of events such as disease progression or death to inform prognostic enrichment in oncology time-to-event trials.
  • Time-to-event clinical research: Applies to other clinical fields with time-to-event outcomes to improve trial efficiency and resource allocation by focusing on higher-risk populations.

Methodology:

Performs empirical analysis of real-world biomarker and survival-time data (including censored observations) and uses simulation to generate hypothetical datasets that mirror specified clinical scenarios.

Topics

Details

Tool Type:
web application
Programming Languages:
R
Added:
1/18/2021
Last Updated:
2/4/2021

Operations

Publications

Cheng S, Kerr KF, Thiessen-Philbrook H, Coca SG, Parikh CR. BioPETsurv: Methodology and open source software to evaluate biomarkers for prognostic enrichment of time-to-event clinical trials. PLOS ONE. 2020;15(9):e0239486. doi:10.1371/journal.pone.0239486. PMID:32946505. PMCID:PMC7500596.