BioStudies
BioStudies organizes and manages experimental data and metadata from biological studies, accommodating diverse multiomics datasets and linking them to publications for long-term accessibility.
Key Features:
- Study Organization: Provides a structured format for describing study architecture and associated metadata.
- Flexible Data Deposition: Supports deposition of data within BioStudies, in remote repositories, or both.
- Data Access Interfaces: Exposes deposited data through multiple access interfaces.
- Integration with Europe PMC: Imports supplementary data from Europe PMC to associate datasets with manuscripts.
- Support for Collaborative Projects: Accommodates data management requirements of collaborative research projects.
Scientific Applications:
- Multiomics data management: Manages diverse outputs from multiomics experiments generated across different locations.
- Publication linking and archival: Links datasets and supplementary materials to associated publications to ensure coherence and long-term accessibility.
- Collaborative study data coordination: Facilitates coherent storage and sharing of study-related data in collaborative projects.
Methodology:
Uses a structured study description format and flexible deposition mechanisms that accommodate local and remote storage and imports supplementary materials from Europe PMC.
Topics
Details
- Tool Type:
- web application
- Added:
- 2/13/2019
- Last Updated:
- 11/25/2024
Operations
Publications
Sarkans U, Gostev M, Athar A, Behrangi E, Melnichuk O, Ali A, Minguet J, Rada JC, Snow C, Tikhonov A, Brazma A, McEntyre J. The BioStudies database—one stop shop for all data supporting a life sciences study. Nucleic Acids Research. 2017;46(D1):D1266-D1270. doi:10.1093/nar/gkx965. PMID:29069414. PMCID:PMC5753238.