BootFam

BootFam takes as input a set of homologous protein sequences, a species tree, and a sequence-to-species mapping. The output is a set of gene families relative to the species tree.

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Topics

Sequences Phylogenetics Gene families Mapping Protein families

Details

Tool Type:: command-line tool
Operating Systems:: Linux, Windows, Mac
Programming Languages:: Perl
Added:: 12/18/2017
Last Updated:: 12/10/2018

Operations

Mapping

Documentation

General

http://www.csc.kth.se/~arve/code/bootfam/

Links

Software catalogue

http://www.mybiosoftware.com/bootfam-define-geneprotein-families.html

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