BossDB
BossDB provides storage and programmatic access to petabyte-scale volumetric neuroscience imaging datasets to support scalable indexing, querying, and annotation for large-scale neuroimaging analyses.
Key Features:
- Scalable Storage and Access: Handles storage and retrieval of petascale volumetric image datasets with architecture that supports dataset-scale growth.
- RESTful API Integration: Exposes a RESTful API for programmatic data ingest, retrieval, and interaction with volumetric data.
- Spatial Data Indexing: Implements scalable spatial indexing mechanisms to enable efficient queries across large volumetric datasets.
- Annotation Support: Stores and exposes automatic and manual annotations that mark regions of interest within volumetric datasets.
Scientific Applications:
- Neuroimaging Studies: Storage and access of high-resolution brain imaging data to support analyses of neural structure and function.
- Data Sharing and Collaboration: Distribution and programmatic exchange of large volumetric datasets with associated annotations for collaborative research.
- Cross-Disciplinary Research: Application to other fields generating volumetric data, such as genomics and materials science, for large-scale spatial analyses.
Methodology:
Cloud-based data ingestion and storage combined with advanced spatial indexing techniques and RESTful API integration.
Topics
Details
- Cost:
- Free of charge
- Tool Type:
- web application
- Operating Systems:
- Mac, Linux, Windows
- Added:
- 6/22/2022
- Last Updated:
- 6/22/2022
Operations
Publications
Hider R, Kleissas D, Gion T, Xenes D, Matelsky J, Pryor D, Rodriguez L, Johnson EC, Gray-Roncal W, Wester B. The Brain Observatory Storage Service and Database (BossDB): A Cloud-Native Approach for Petascale Neuroscience Discovery. Frontiers in Neuroinformatics. 2022;16. doi:10.3389/fninf.2022.828787. PMID:35242021. PMCID:PMC8885591.