BOVIDS

BOVIDS employs deep learning to identify and classify nocturnal behavioral poses in African ungulates from video and image data to enable quantitative analysis of nocturnal activity patterns.


Key Features:

  • Pose estimation: Identifies three behavioral poses — "Standing", "Lying-head up", and "Lying-head down".
  • Classification accuracy: Achieves 99.4% accuracy for the specified pose classes.
  • Data processing scale: Applied to over 11,411 hours of video footage in the described case study.
  • Case study dataset: Analyzed observations from 25 common elands (Tragelaphus oryx) across five EAZA zoos covering 822 nights.
  • Analytical outputs: Produces quantitative estimates of nocturnal activity budgets, phase lengths, and number of phases per behavioral state.

Scientific Applications:

  • Nocturnal behavior quantification: Enables detailed description of nightly behavior in common elands and other African ungulates from video material.
  • Comparative demographic analysis: Supports analyses of age- and sex-dependent differences in nocturnal activity budgets, phase lengths, and phase counts.
  • Sleep posture analysis: Detects differences in time spent in REM sleep posture between males and females and across age classes.
  • Behavioral rhythm detection: Facilitates identification of rhythmic patterns between Standing and Lying phases relevant to behavioral ecology.
  • Welfare and husbandry assessment: Provides quantitative data to inform animal welfare assessments and optimization of husbandry conditions.

Methodology:

BOVIDS employs deep learning algorithms to automate the identification and classification of behavioral poses from video and image data.

Topics

Details

License:
GPL-3.0
Cost:
Free of charge
Tool Type:
workflow
Operating Systems:
Mac, Linux, Windows
Programming Languages:
Python
Added:
3/29/2022
Last Updated:
3/29/2022

Operations

Data Inputs & Outputs

Phasing

Outputs

    Publications

    Gübert J, Hahn‐Klimroth M, Dierkes PW. BOVIDS: A deep learning‐based software package for pose estimation to evaluate nightly behavior and its application to common elands (<i>Tragelaphus oryx</i>) in zoos. Ecology and Evolution. 2022;12(3). doi:10.1002/ece3.8701. PMID:35342615. PMCID:PMC8928879.

    Links