BrainNetClass

BrainNetClass constructs and classifies functional brain networks to model high-order interactions and enable connectome-based analyses for individualized disease diagnosis and neuroscience research.


Key Features:

  • Advanced network construction methods: Implements methods to capture complex and high-order interactions among brain regions, extending beyond traditional static pairwise Pearson's correlation-based functional networks.
  • Classification framework: Applies a rigorous classification framework based on brain connectome features to support individualized disease diagnosis.
  • Comprehensive classification outputs: Produces a range of classification-related results including network representations and identification of contributing features to assess model robustness and generalizability.
  • Validation on resting-state functional MRI: Demonstrated effectiveness using real resting-state functional MRI datasets.
  • MATLAB implementation: Provided as a MATLAB-based platform for implementation and analysis.

Scientific Applications:

  • Connectome-based disease diagnosis: Supports individualized diagnosis by leveraging connectome-derived features for classification of disease states.
  • Network-level investigation of brain function and disorders: Enables study of complex and high-order interactions in functional brain networks to investigate brain function and pathology.
  • Evaluation of diagnostic model robustness: Facilitates assessment of model robustness and generalizability using network outputs and contributing feature analyses.

Methodology:

Implemented in MATLAB; constructs functional brain networks using high-order interaction methods beyond pairwise Pearson's correlation; applies classification based on brain connectome features; outputs network representations and contributing features; validated on resting-state functional MRI datasets.

Topics

Details

Tool Type:
workflow
Programming Languages:
MATLAB, C, C++, Java
Added:
1/18/2021
Last Updated:
2/6/2021

Operations

Publications

Zhou Z, Chen X, Zhang Y, Hu D, Qiao L, Yu R, Yap P, Pan G, Zhang H, Shen D. A toolbox for brain network construction and classification (BrainNetClass). Human Brain Mapping. 2020;41(10):2808-2826. doi:10.1002/hbm.24979. PMID:32163221. PMCID:PMC7294070.

PMID: 32163221
PMCID: PMC7294070
Funding: - National Institutes of Health: AG041721, AG042599, EB022880