BRCA-diagnostic
BRCA-diagnostic identifies mutations in BRCA1 and BRCA2 from whole genome sequencing (WGS) data to detect known pathogenic variants implicated in hereditary breast and ovarian cancer.
Key Features:
- BRCA1 and BRCA2 mutation identification: Detects mutations within BRCA1 and BRCA2 using whole genome sequencing (WGS) data.
- Whole Genome Sequencing integration: Leverages WGS to enable identification of both known and potentially novel variants across the genome.
- Algorithmic analysis: Applies advanced computational algorithms to analyze WGS data for systematic variant identification.
Scientific Applications:
- Genetic screening: Supports genetic screening programs to identify individuals at increased risk for hereditary breast and ovarian cancer by detecting BRCA1 and BRCA2 mutations.
- Research utility: Enables research on cancer susceptibility, including studies of gene-environment interactions and mutation impacts, using BRCA-focused variant data from WGS.
Methodology:
Employs advanced algorithms to analyze whole genome sequencing (WGS) data and systematically identify mutations within the BRCA1 and BRCA2 genes.
Topics
Details
- Cost:
- Free of charge
- Tool Type:
- command-line tool
- Operating Systems:
- Linux, Windows, Mac
- Programming Languages:
- Perl
- Added:
- 1/13/2017
- Last Updated:
- 11/25/2024
Operations
Publications
Salzberg SL, Pertea M. Do-it-yourself genetic testing. Genome Biology. 2010;11(10). doi:10.1186/gb-2010-11-10-404. PMID:20932271. PMCID:PMC3218655.