BRCA-diagnostic

BRCA-diagnostic identifies mutations in BRCA1 and BRCA2 from whole genome sequencing (WGS) data to detect known pathogenic variants implicated in hereditary breast and ovarian cancer.


Key Features:

  • BRCA1 and BRCA2 mutation identification: Detects mutations within BRCA1 and BRCA2 using whole genome sequencing (WGS) data.
  • Whole Genome Sequencing integration: Leverages WGS to enable identification of both known and potentially novel variants across the genome.
  • Algorithmic analysis: Applies advanced computational algorithms to analyze WGS data for systematic variant identification.

Scientific Applications:

  • Genetic screening: Supports genetic screening programs to identify individuals at increased risk for hereditary breast and ovarian cancer by detecting BRCA1 and BRCA2 mutations.
  • Research utility: Enables research on cancer susceptibility, including studies of gene-environment interactions and mutation impacts, using BRCA-focused variant data from WGS.

Methodology:

Employs advanced algorithms to analyze whole genome sequencing (WGS) data and systematically identify mutations within the BRCA1 and BRCA2 genes.

Topics

Details

Cost:
Free of charge
Tool Type:
command-line tool
Operating Systems:
Linux, Windows, Mac
Programming Languages:
Perl
Added:
1/13/2017
Last Updated:
11/25/2024

Operations

Publications

Salzberg SL, Pertea M. Do-it-yourself genetic testing. Genome Biology. 2010;11(10). doi:10.1186/gb-2010-11-10-404. PMID:20932271. PMCID:PMC3218655.