Breast Dense Tissue Segmentation
Breast Dense Tissue Segmentation segments dense tissue and the overall breast area in digital mammograms using a confusion matrix (CM)-YNet deep learning model to quantify breast density for breast cancer risk assessment.
Key Features:
- Automated segmentation: Automatically identifies and segments the overall breast area and dense tissue within digital mammograms.
- CM-YNet deep learning: Implements a confusion matrix (CM)-YNet model to handle noisy labels by modeling each radiologist's labels for improved ground-truth estimation.
- Breast detection and pectoral muscle exclusion: Includes explicit breast detection and exclusion of the pectoral muscle to restrict segmentation to relevant breast tissue.
Scientific Applications:
- Breast cancer risk assessment: Provides quantitative breast density measurements to support identification of individuals at elevated risk for breast cancer.
- Research and clinical studies: Produces reliable segmentation outputs for multi-center studies and clinical research on the relationship between breast density and cancer incidence.
Methodology:
The workflow uses a confusion matrix (CM)-YNet model that models each radiologist’s labels to address label variability, includes breast detection and pectoral muscle exclusion, and was validated on a multi-center mammogram corpus with an average DICE score of 0.82.
Topics
Collections
Details
- License:
- Proprietary
- Maturity:
- Mature
- Tool Type:
- command-line tool
- Operating Systems:
- Windows, Mac, Linux
- Programming Languages:
- Python
- Added:
- 5/22/2025
- Last Updated:
- 11/12/2025
Operations
Data Inputs & Outputs
Image annotation
Publications
Larroza A, Pérez-Benito FJ, Perez-Cortes J, Román M, Pollán M, Pérez-Gómez B, Salas-Trejo D, Casals M, Llobet R. Breast Dense Tissue Segmentation with Noisy Labels: A Hybrid Threshold-Based and Mask-Based Approach. Diagnostics. 2022;12(8):1822. doi:10.3390/diagnostics12081822. PMID:36010173. PMCID:PMC9406546.