BRISSKit

BRISSKit provides integrated, open-source, cloud-enabled infrastructure for secure management, storage, and analysis of participant, sample, and large-scale biomedical datasets to support translational and cohort research.


Key Features:

  • Integrated Infrastructure: Manages participant information, data and sample collection, storage, interrogation, and analysis within a unified platform.
  • Open Source Components: Built from multiple open source technologies to enable customization and extensibility.
  • Cloud-enabled Architecture: Leverages cloud deployment to centralize data and processes and support scalable research workloads.
  • Security and Permissions: Implements controlled access and permissions to protect participant information and research data.

Scientific Applications:

  • Cohort and translational studies: Supports studies involving patient cohorts by centralizing participant data and associated biosamples and datasets.
  • Participant, sample, and dataset management: Enables collection, storage, and organization of biosamples and large-scale datasets for downstream analysis.
  • Complex data analysis workflows: Provides infrastructure to perform interrogation and analysis of biomedical data at scale.

Methodology:

BRISSKit uses a service-oriented architecture that integrates multiple open source components and centralizes data and processes within a secure cloud-based environment.

Topics

Details

Tool Type:
api, command-line tool, web application, workflow
Operating Systems:
Linux, Windows, Mac
Added:
11/6/2016
Last Updated:
12/10/2018

Operations

Data Inputs & Outputs

Publications

Butters OW, Issa S, Lusted J, Newbury M, Parsloe R, Holden N, Free RC, Beck T, Wilson RC, Burton PR, Tedds JA. The Biomedical Research Infrastructure Software as a Service Kit (BRISSKit): technical description. F1000Research. 2016;5:1905. doi:10.12688/f1000research.8736.1.

Documentation

Links