BRISSKit
BRISSKit provides integrated, open-source, cloud-enabled infrastructure for secure management, storage, and analysis of participant, sample, and large-scale biomedical datasets to support translational and cohort research.
Key Features:
- Integrated Infrastructure: Manages participant information, data and sample collection, storage, interrogation, and analysis within a unified platform.
- Open Source Components: Built from multiple open source technologies to enable customization and extensibility.
- Cloud-enabled Architecture: Leverages cloud deployment to centralize data and processes and support scalable research workloads.
- Security and Permissions: Implements controlled access and permissions to protect participant information and research data.
Scientific Applications:
- Cohort and translational studies: Supports studies involving patient cohorts by centralizing participant data and associated biosamples and datasets.
- Participant, sample, and dataset management: Enables collection, storage, and organization of biosamples and large-scale datasets for downstream analysis.
- Complex data analysis workflows: Provides infrastructure to perform interrogation and analysis of biomedical data at scale.
Methodology:
BRISSKit uses a service-oriented architecture that integrates multiple open source components and centralizes data and processes within a secure cloud-based environment.
Topics
Details
- Tool Type:
- api, command-line tool, web application, workflow
- Operating Systems:
- Linux, Windows, Mac
- Added:
- 11/6/2016
- Last Updated:
- 12/10/2018
Operations
Data Inputs & Outputs
Aggregation
Inputs
Publications
Butters OW, Issa S, Lusted J, Newbury M, Parsloe R, Holden N, Free RC, Beck T, Wilson RC, Burton PR, Tedds JA. The Biomedical Research Infrastructure Software as a Service Kit (BRISSKit): technical description. F1000Research. 2016;5:1905. doi:10.12688/f1000research.8736.1.
Documentation
Terms of use
https://wiki.brisskit.le.ac.uk/wiki/LegalCitation instructions
https://www.brisskit.le.ac.uk/node/64Links
Repository
https://github.com/brisskit-uol/