CAD

CAD compiles verified cancer antigen peptide datasets to support prediction and filtering of neoantigens—peptides arising from tumor-specific mutations that can elicit immune responses without inducing central tolerance—for personalized cancer vaccine development.


Key Features:

  • Rapid prediction and filtering: Performs rapid prediction and filtering of neoantigen peptides to enable candidate prioritization.
  • Verified dataset integration: Integrates verified datasets of cancer antigen peptides to provide evidence-backed peptide records.
  • Peptide compilation and organization: Compiles and organizes comprehensive peptide information and properties relevant to cancer antigens.
  • Algorithm refinement support: Facilitates improvement and refinement of existing algorithms for predicting cancer antigens, with emphasis on neoantigens.
  • Neoantigen property insights: Provides curated data to investigate neoantigen characteristics, including origin from tumor-specific mutations and immunogenic potential.

Scientific Applications:

  • Vaccine candidate prioritization: Prioritization and selection of neoantigens for personalized cancer vaccine development.
  • Neoantigen characterization: Investigation of neoantigen properties, including tumor-specific mutation origin and potential to elicit immune responses without central tolerance.
  • Algorithm benchmarking and validation: Benchmarking and refinement of antigen-prediction methodologies using verified peptide datasets.
  • Preclinical and clinical research support: Supporting preclinical and clinical research in cancer vaccine development by supplying curated, verified peptide datasets.

Methodology:

Integrates verified cancer antigen peptide datasets and compiles organized peptide information to enable rapid prediction and filtering of neoantigen peptides and to support refinement of prediction algorithms.

Topics

Details

License:
Not licensed
Tool Type:
web application
Operating Systems:
Mac, Linux, Windows
Added:
9/5/2022
Last Updated:
9/5/2022

Operations

Publications

Yu J, Wang L, Kong X, Cao Y, Zhang M, Sun Z, Liu Y, Wang J, Shen B, Bo X, Feng J. CAD v1.0: Cancer Antigens Database Platform for Cancer Antigen Algorithm Development and Information Exploration. Frontiers in Bioengineering and Biotechnology. 2022;10. doi:10.3389/fbioe.2022.819583. PMID:35646870. PMCID:PMC9133807.

Documentation

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