CAT-Net

CAT-Net implements a cross-slice attention Transformer to improve prostate zonal segmentation in magnetic resonance imaging (MRI) by learning multi-scale information from adjacent slices.


Key Features:

  • Cross-Slice Attention Mechanism: Learns and exploits multi-scale image-based information from adjacent MRI slices to capture cross-slice context for segmentation.
  • Transformer Module Integration: Embeds the cross-slice attention within a Transformer module to process and integrate multi-scale, cross-slice information and operate with skip-connection-based segmentation architectures.
  • Improved Segmentation Accuracy: Enhances segmentation accuracy and consistency across prostate slices—apex, mid-gland, and base—with particular improvement in peripheral zone delineation.

Scientific Applications:

  • Prostate Cancer Diagnosis and Treatment Planning: Provides more reliable prostate zonal segmentation in MRI to support diagnostic imaging and treatment planning for prostate cancer, a leading cause of cancer death among men in the United States.

Methodology:

Implements a cross-slice attention mechanism that learns multi-scale image-based information from adjacent MRI slices and embeds this mechanism in a Transformer module for use in deep-learning segmentation architectures employing skip connections.

Topics

Details

Tool Type:
command-line tool
Programming Languages:
Python
Added:
12/23/2022
Last Updated:
11/24/2024

Operations

Publications

Hung ALY, Zheng H, Miao Q, Raman SS, Terzopoulos D, Sung K. CAT-Net: A Cross-Slice Attention Transformer Model for Prostate Zonal Segmentation in MRI. IEEE Transactions on Medical Imaging. 2023;42(1):291-303. doi:10.1109/tmi.2022.3211764. PMID:36194719. PMCID:PMC10071136.

PMID: 36194719
Funding: - National Institutes of Health: R01-CA248506