CBS DAS protein viewer
CBS DAS protein viewer aggregates protein annotation data using the Distributed Annotation System (DAS) to compile layered annotations for specific protein sequences.
Key Features:
- Integration of Multiple Data Sources: Uses the DAS protocol to aggregate annotation layers from diverse servers including the Center for Biological Sequence Analysis and the BioSapiens reference UniProt server at the European Bioinformatics Institute (EBI).
- Layered Annotation Compilation: Compiles and present multiple annotation layers associated with a given protein sequence to provide a consolidated overview of features.
- Scalability: New DAS data sources can be incorporated to expand the set of available annotations.
Scientific Applications:
- Protein annotation aggregation: Consolidates disparate annotations to support interpretation of protein features.
- Functional and structural feature analysis: Supports analysis of protein functions, interactions, and structural features via integrated annotation layers.
- Molecular biology, genetics, and proteomics studies: Facilitates exploration of complex datasets relevant to molecular biology, genetics, and proteomics.
Methodology:
Operates via the Distributed Annotation System (DAS) by connecting to multiple annotation servers and dynamically fetching relevant annotation layers for a queried protein sequence.
Topics
Details
- License:
- Other
- Maturity:
- Mature
- Cost:
- Free of charge
- Tool Type:
- web application
- Operating Systems:
- Linux, Windows, Mac
- Programming Languages:
- JavaScript
- Added:
- 2/10/2017
- Last Updated:
- 11/24/2024
Operations
Publications
Olason PI. Integrating protein annotation resources through the Distributed Annotation System. Nucleic Acids Research. 2005;33(Web Server):W468-W470. doi:10.1093/nar/gki463. PMID:15980514. PMCID:PMC1160224.