The Cell: An Image Library

The Cell: An Image Library provides a searchable, curated archive of light and electron microscopy images and associated metadata to support cellular and subcellular research.


Key Features:

  • Extensive Repository: Contains over 9,250 images derived from 358 different species.
  • Imaging Modalities: Includes light and electron microscopy images as well as multi-dimensional images, Z-stacks, time-lapse sequences, movies, and animations.
  • Format Support: Accepts various raw data formats to accommodate current and emerging imaging technologies.
  • Dynamic Software Design: Software architecture enables integration of new image formats and technological advancements.
  • Quality Control and Annotation: Images are evaluated for quality and annotated with terms from 14 ontologies across 16 fields, supplemented by basic descriptions and technical details.

Scientific Applications:

  • Comparative Morphology: Supports comparative studies across species using the multi-species image collection.
  • Cellular Architecture and Function: Enables analysis of cellular and subcellular structures and processes from microscopy data.
  • Ontology-driven Image Retrieval: Facilitates targeted retrieval and selection of images for image-based analyses via ontology annotations.

Methodology:

Images undergo curation and quality evaluation and are annotated using terms from 14 ontologies across 16 fields; the software architecture is designed to incorporate diverse imaging data and new file formats.

Topics

Details

Tool Type:
web application
Operating Systems:
Linux, Windows, Mac
Added:
4/25/2017
Last Updated:
4/15/2021

Operations

Publications

Orloff DN, Iwasa JH, Martone ME, Ellisman MH, Kane CM. The cell: an image library-CCDB: a curated repository of microscopy data. Nucleic Acids Research. 2012;41(D1):D1241-D1250. doi:10.1093/nar/gks1257. PMID:23203874. PMCID:PMC3531121.

Documentation