The Cell: An Image Library
The Cell: An Image Library provides a searchable, curated archive of light and electron microscopy images and associated metadata to support cellular and subcellular research.
Key Features:
- Extensive Repository: Contains over 9,250 images derived from 358 different species.
- Imaging Modalities: Includes light and electron microscopy images as well as multi-dimensional images, Z-stacks, time-lapse sequences, movies, and animations.
- Format Support: Accepts various raw data formats to accommodate current and emerging imaging technologies.
- Dynamic Software Design: Software architecture enables integration of new image formats and technological advancements.
- Quality Control and Annotation: Images are evaluated for quality and annotated with terms from 14 ontologies across 16 fields, supplemented by basic descriptions and technical details.
Scientific Applications:
- Comparative Morphology: Supports comparative studies across species using the multi-species image collection.
- Cellular Architecture and Function: Enables analysis of cellular and subcellular structures and processes from microscopy data.
- Ontology-driven Image Retrieval: Facilitates targeted retrieval and selection of images for image-based analyses via ontology annotations.
Methodology:
Images undergo curation and quality evaluation and are annotated using terms from 14 ontologies across 16 fields; the software architecture is designed to incorporate diverse imaging data and new file formats.
Topics
Details
- Tool Type:
- web application
- Operating Systems:
- Linux, Windows, Mac
- Added:
- 4/25/2017
- Last Updated:
- 4/15/2021
Operations
Publications
Orloff DN, Iwasa JH, Martone ME, Ellisman MH, Kane CM. The cell: an image library-CCDB: a curated repository of microscopy data. Nucleic Acids Research. 2012;41(D1):D1241-D1250. doi:10.1093/nar/gks1257. PMID:23203874. PMCID:PMC3531121.