ChemMaps

ChemMaps maps chemical space and visualizes molecular descriptors to enable exploration of relationships among drugs and environmental chemicals.


Key Features:

  • Comprehensive chemical collection: Includes over 8,000 drugs (approved, in development, or rejected) and more than 47,000 environmental chemicals.
  • Integration with public datasets: Supports exploration of compounds from large public databases such as DrugBank, ChEMBL, and Tox21.
  • Projection-based visualization: Visualizes molecular descriptors using advanced projection techniques.
  • Precomputed descriptors: Provides molecular descriptors computed for compounds to enable direct visualization and analysis.

Scientific Applications:

  • Drug discovery: Facilitates analysis of chemical relationships and compound similarity across approved and developmental drug sets.
  • Environmental chemistry: Enables exploration of large collections of environmental chemicals for comparative analyses.
  • Toxicology studies: Supports visualization and mining of chemical space relevant to toxicological profiling.
  • Bioinformatics and computational chemistry: Aids large-scale chemical space analyses and mapping of molecular descriptor patterns.

Methodology:

Leverages advanced projection techniques to visualize molecular descriptors.

Topics

Details

Tool Type:
web application
Operating Systems:
Linux, Windows, Mac
Programming Languages:
JavaScript
Added:
7/3/2018
Last Updated:
11/25/2024

Operations

Publications

Borrel A, Kleinstreuer NC, Fourches D. Exploring drug space with <i>ChemMaps.com</i>. Bioinformatics. 2018;34(21):3773-3775. doi:10.1093/bioinformatics/bty412. PMID:29790904. PMCID:PMC6454477.

Documentation