Clann

Clann constructs consensus trees and supertrees to integrate phylogenetic information from multiple source trees for analysis of evolutionary relationships.


Key Features:

  • Supertree construction: Combines multiple phylogenetic source trees into a single unified supertree that synthesizes disparate datasets.
  • Consensus tree generation: Produces consensus trees that summarize shared phylogenetic signal across multiple source trees.

Scientific Applications:

  • Conflict resolution among phylogenetic hypotheses: Identifies and helps reconcile topological conflicts across different source trees.
  • Integration of diverse datasets: Synthesizes phylogenetic information from multiple studies or data sources into a cohesive framework.
  • Improving evolutionary model inference: Supports more robust evolutionary analyses by incorporating multiple phylogenetic inputs when deriving models.

Methodology:

Implemented in the C programming language.

Topics

Details

License:
GPL-2.0
Cost:
Free of charge
Tool Type:
command-line tool
Operating Systems:
Mac, Linux, Windows
Programming Languages:
C, Shell
Added:
3/16/2022
Last Updated:
3/16/2022

Operations

Publications

Creevey CJ, McInerney JO. Clann: investigating phylogenetic information through supertree analyses. Bioinformatics. 2004;21(3):390-392. doi:10.1093/bioinformatics/bti020. PMID:15374874.

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