CNGBdb

CNGBdb provides archival, processing, and sharing of genomic and multi-omics sequencing data to support life-sciences research and analysis.

Key Features:

• Data archiving: Archival of genomic and multi-omics sequencing data with a comprehensive schema for records.
• Analysis services: Computational capabilities for data processing and analysis of high-throughput sequencing datasets.
• Knowledge search: Information search engines for querying archived projects, samples, experiments, and sequences.
• Management authorization: Tools for managing data access and authorization within the platform.
• Visualization: Visualization services for explored and analyzed biological data.
• Sample and data repositories: Rich repository of sample resources and extensive data collections from cooperative projects.
• Support for high-throughput sequencing: Explicit support for data generated by high-throughput sequencing technologies.
• Database schema: Schema encompassing projects, samples, experiments, runs, assemblies, variations, and sequences.
• Computing infrastructure: Use of big data and cloud computing technologies to enable large-scale data handling.
• Data management tools: Tools for effective data management and archival workflows.

Scientific Applications:

• Genomic data archiving: Long-term storage and organization of sequencing-based genomic and multi-omics datasets.
• High-throughput sequencing projects: Processing and analysis support for large-scale sequencing projects and runs.
• Data discovery and reuse: Enabling search and retrieval of projects, samples, experiments, assemblies, variations, and sequences for downstream research.
• Collaborative research: Facilitating cooperative projects and international data sharing to support life-science research and industrial utilization.

Methodology:

Leverages big data and cloud computing technologies; implements a comprehensive database schema covering projects, samples, experiments, runs, assemblies, variations, and sequences; and provides information search engines plus tools for data management, analysis, visualization, and management authorization.