COCONUT
COCONUT aggregates natural product data from multiple open-access sources into a consolidated dataset to support computational natural product research.
Key Features:
- Aggregated Dataset: Compiles chemical structures and associated metadata of natural products (NPs) from multiple open-access databases into a unified collection.
- Elucidated and Predicted Compounds: Includes both experimentally elucidated (validated) natural products and compounds predicted through computational methods.
- Support for Computational Screening: Provides a dataset suitable for high-throughput virtual screening and other computational analyses.
Scientific Applications:
- Computational Screening: Enables high-throughput virtual screening to identify potential bioactive natural products.
- In Silico Studies: Supports modelling of interactions between NPs and biological targets, prediction of pharmacokinetic properties, and exploration of metabolic pathways.
- Cross-Disciplinary Research: Facilitates studies spanning biochemistry, molecular biology, and medicinal chemistry by aggregating diverse NP data sources.
Methodology:
Systematic collection and aggregation of natural product records from various open-access databases, incorporating both experimentally validated and computationally predicted compound entries.
Topics
Details
- Tool Type:
- api, web application
- Added:
- 1/18/2021
- Last Updated:
- 2/14/2021
Operations
Publications
Sorokina M, Merseburger P, Rajan K, Yirik MA, Steinbeck C. Coconut Online: Collection of Open Natural Products Database. Unknown Journal. 2020. doi:10.21203/rs.3.rs-75600/v1.
Documentation
Downloads
- Downloads pagehttps://coconut.naturalproducts.net/download
Links
Repository
https://github.com/mSorok/COCONUT