COCONUT

COCONUT aggregates natural product data from multiple open-access sources into a consolidated dataset to support computational natural product research.


Key Features:

  • Aggregated Dataset: Compiles chemical structures and associated metadata of natural products (NPs) from multiple open-access databases into a unified collection.
  • Elucidated and Predicted Compounds: Includes both experimentally elucidated (validated) natural products and compounds predicted through computational methods.
  • Support for Computational Screening: Provides a dataset suitable for high-throughput virtual screening and other computational analyses.

Scientific Applications:

  • Computational Screening: Enables high-throughput virtual screening to identify potential bioactive natural products.
  • In Silico Studies: Supports modelling of interactions between NPs and biological targets, prediction of pharmacokinetic properties, and exploration of metabolic pathways.
  • Cross-Disciplinary Research: Facilitates studies spanning biochemistry, molecular biology, and medicinal chemistry by aggregating diverse NP data sources.

Methodology:

Systematic collection and aggregation of natural product records from various open-access databases, incorporating both experimentally validated and computationally predicted compound entries.

Topics

Details

Tool Type:
api, web application
Added:
1/18/2021
Last Updated:
2/14/2021

Operations

Publications

Sorokina M, Merseburger P, Rajan K, Yirik MA, Steinbeck C. Coconut Online: Collection of Open Natural Products Database. Unknown Journal. 2020. doi:10.21203/rs.3.rs-75600/v1.

Documentation

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