CODECHECK

CODECHECK verifies the executability of computational workflows underlying scientific publications to improve reproducibility and transparency during peer review.


Key Features:

  • Independent execution: Performs independent execution of computations underpinning scientific publications during peer review.
  • Open infrastructure: Leverages open infrastructure and tools to run and assess computational workflows.
  • Integration into review processes: Integrates verification steps into review and publication processes across the dimensions of importance, stakeholder involvement, openness, and timing.
  • Structured verification: Provides a structured approach to verifying the executability of computational workflows associated with scientific articles.
  • Publisher collaboration: Collaborates with academic publishers and conferences to implement executability checks within publication contexts.
  • Empirical demonstration: Demonstrated reproducibility through 25 reproductions of diverse scientific publications.
  • Non-textual artifact assessment: Assesses accessibility and executability of non-textual research artifacts to enhance transparency.

Scientific Applications:

  • Peer-review verification: Enable independent execution of computations during peer review to verify reported results.
  • Publication quality control: Support journals and conferences in incorporating executability checks into publication workflows.
  • Reproducibility assessment: Provide evidence for reproducibility standards and track reproducibility across computational research.
  • Non-textual artifact evaluation: Evaluate the accessibility and executability of computational workflows associated with manuscripts.

Methodology:

Executes computational workflows using open infrastructure and tools to verify their executability, as demonstrated by 25 reproductions of scientific publications.

Topics

Details

License:
CC-BY-SA-4.0
Tool Type:
workflow
Added:
6/14/2021
Last Updated:
8/23/2021

Operations

Publications

Nüst D, Eglen SJ. CODECHECK: an Open Science initiative for the independent execution of computations underlying research articles during peer review to improve reproducibility. F1000Research. 2021;10:253. doi:10.12688/f1000research.51738.1.

Funding: - German Research Foundation: PE1632/17-1

Links