Combenefit
Combenefit quantifies and visualizes drug combination effects to identify synergistic and antagonistic interactions in drug combination assays.
Key Features:
- Visualization and analysis: Provides visualization and analysis of data from drug combination assays to support interpretation of combination effects.
- Quantification of effects: Quantifies synergy and antagonism using classical models Loewe, Bliss, and Highest Single Agent (HSA).
- Batch processing for HTS: Supports single-experiment analysis and batch processing for High Throughput Screens (HTS).
Scientific Applications:
- Drug discovery and development: Evaluation of combination efficacy and interaction types to inform therapeutic development.
- High-throughput screening analysis: Analysis of HTS combination datasets to identify synergistic or antagonistic compound combinations.
- Experimental and computational research: Used by laboratory scientists and bioinformaticians to analyze and quantify drug combination assay data.
Methodology:
Processes data from combination assays by applying established synergy models (Loewe, Bliss, HSA) to quantify interaction effects.
Topics
Details
- License:
- MIT
- Tool Type:
- desktop application
- Operating Systems:
- Windows
- Programming Languages:
- MATLAB
- Added:
- 10/20/2018
- Last Updated:
- 12/10/2018
Operations
Publications
Di Veroli GY, Fornari C, Wang D, Mollard S, Bramhall JL, Richards FM, Jodrell DI. Combenefit: an interactive platform for the analysis and visualization of drug combinations. Bioinformatics. 2016;32(18):2866-2868. doi:10.1093/bioinformatics/btw230. PMID:27153664. PMCID:PMC5018366.