Commet

Commet provides a comprehensive similarity overview across all datasets within large metagenomic projects.


Key Features:

  • Global Similarity Overview: Offers a holistic view of similarities between diverse metagenomic datasets.
  • Scalability: Scales to analyze extensive metagenomic datasets typical of large projects.
  • Comprehensive Analysis Tools: Includes a suite of analysis features for in-depth exploration of microbial communities.

Scientific Applications:

  • Microbial Ecology Studies: Supports analysis of microbial diversity and community dynamics in ecological studies.
  • Comparative Genomics: Facilitates comparison of metagenomic datasets to identify evolutionary relationships and functional similarities among microorganisms.
  • Environmental Monitoring: Enables assessment of biodiversity and detection of temporal or intervention-driven changes in environmental samples.

Methodology:

Computes a global similarity overview across metagenomic datasets using advanced algorithms and scalable processing.

Topics

Details

Maturity:
Emerging
Cost:
Free of charge
Tool Type:
command-line tool
Operating Systems:
Linux
Added:
1/21/2015
Last Updated:
12/10/2018

Operations

Publications

Maillet N, Collet G, Vannier T, Lavenier D, Peterlongo P. Commet: Comparing and combining multiple metagenomic datasets. 2014 IEEE International Conference on Bioinformatics and Biomedicine (BIBM). 2014. doi:10.1109/bibm.2014.6999135.

Documentation