Commet
Commet provides a comprehensive similarity overview across all datasets within large metagenomic projects.
Key Features:
- Global Similarity Overview: Offers a holistic view of similarities between diverse metagenomic datasets.
- Scalability: Scales to analyze extensive metagenomic datasets typical of large projects.
- Comprehensive Analysis Tools: Includes a suite of analysis features for in-depth exploration of microbial communities.
Scientific Applications:
- Microbial Ecology Studies: Supports analysis of microbial diversity and community dynamics in ecological studies.
- Comparative Genomics: Facilitates comparison of metagenomic datasets to identify evolutionary relationships and functional similarities among microorganisms.
- Environmental Monitoring: Enables assessment of biodiversity and detection of temporal or intervention-driven changes in environmental samples.
Methodology:
Computes a global similarity overview across metagenomic datasets using advanced algorithms and scalable processing.
Topics
Details
- Maturity:
- Emerging
- Cost:
- Free of charge
- Tool Type:
- command-line tool
- Operating Systems:
- Linux
- Added:
- 1/21/2015
- Last Updated:
- 12/10/2018
Operations
Publications
Maillet N, Collet G, Vannier T, Lavenier D, Peterlongo P. Commet: Comparing and combining multiple metagenomic datasets. 2014 IEEE International Conference on Bioinformatics and Biomedicine (BIBM). 2014. doi:10.1109/bibm.2014.6999135.