Computase

Local Python sequence utilities for nucleotide composition, DNA and RNA reverse complements, NCBI genetic-code translation, six-frame candidate ORF enumeration, and IUPAC motif searches. Computase accepts raw nucleotide strings or one FASTA record and returns structured, bounded results with explicit scientific conventions.

Visit Official Homepage →

Topics

Nucleic acids Sequence analysis

Details

License:: MIT
Maturity:: Emerging
Cost:: Free of charge
Tool Type:: library
Operating Systems:: Linux, Mac, Windows
Programming Languages:: Python
Added:: 8/11/2026
Last Updated:: 8/11/2026

Operations

Data Inputs & Outputs

Sequence feature detection

Inputs

Nucleic acid sequence
- FASTA
- plain text format (unformatted)

Outputs

Sequence features
- JSON

Reverse complement

Inputs

Nucleic acid sequence
- FASTA
- plain text format (unformatted)

Outputs

Nucleic acid sequence
- JSON

Sequence composition calculation

Inputs

Nucleic acid sequence
- FASTA
- plain text format (unformatted)

Outputs

Sequence composition report
- JSON

DNA translation

Inputs

Nucleic acid sequence
- FASTA
- plain text format (unformatted)

Outputs

Protein sequence
- JSON

Sequence motif recognition

Inputs

Outputs

Sequence features
- JSON

Documentation

Citation instructions', 'General', 'Installation instructions', 'Quick start guide

https://github.com/madhusudan-kulkarni/computase#readme

Release notes

https://github.com/madhusudan-kulkarni/computase/blob/main/CHANGELOG.md

Downloads

Software package
Version: 0.1.1
https://pypi.org/project/computase/
Source code
Version: 0.1.1
https://github.com/madhusudan-kulkarni/computase/archive/refs/tags/v0.1.1.tar.gz

Links

Issue tracker

https://github.com/madhusudan-kulkarni/computase/issues

Repository

https://github.com/madhusudan-kulkarni/computase

← Back to search