CoMutDB

CoMutDB characterizes somatic mutation co-occurrence in cancer by aggregating and cataloging multi-omics data from over 30,000 subjects and 1,747 cancer cell lines.


Key Features:

  • Comprehensive Data Collection: Aggregates somatic mutation data from over 30,000 subjects and 1,747 cancer cell lines across diverse cancer types.
  • Multi-Omics Integration: Integrates data from multiple omic layers to enable analysis of interactions between different molecular datasets.
  • Catalog of Co-mutation Pairs: Systematically catalogs somatic mutation pairs with associated characteristics and contextual information for each co-mutation event.
  • Centralized Co-mutation Resource: Provides a dedicated, centralized repository focused specifically on cancer co-mutations to support comparative analyses across samples.

Scientific Applications:

  • Tumorigenesis Research: Enables exploration of how somatic co-mutations contribute to cancer development, progression, and heterogeneity.
  • Target Identification: Supports identification of mutation pairs that may drive oncogenic processes and serve as targets for therapeutic investigation.
  • Biomarker Discovery: Facilitates discovery of co-occurrence patterns that can serve as biomarkers for specific cancer types or subtypes.

Methodology:

Integration of multi-omics data and systematic cataloging of somatic mutation pairs across diverse cancer samples with associated characteristics and context.

Topics

Details

License:
Not licensed
Tool Type:
web application
Operating Systems:
Mac, Linux, Windows
Programming Languages:
JavaScript, PHP
Added:
1/27/2023
Last Updated:
11/24/2024

Operations

Publications

Jiang L, Yu H, Tang J, Guo Y. CoMutDB: the landscape of somatic mutation co-occurrence in cancers. Bioinformatics. 2022;39(1). doi:10.1093/bioinformatics/btac725. PMID:36355452. PMCID:PMC9805589.

PMID: 36355452
PMCID: PMC9805589
Funding: - Cancer Center Support: P30CA118100, R01ES030993-01A1