CoMutDB
CoMutDB characterizes somatic mutation co-occurrence in cancer by aggregating and cataloging multi-omics data from over 30,000 subjects and 1,747 cancer cell lines.
Key Features:
- Comprehensive Data Collection: Aggregates somatic mutation data from over 30,000 subjects and 1,747 cancer cell lines across diverse cancer types.
- Multi-Omics Integration: Integrates data from multiple omic layers to enable analysis of interactions between different molecular datasets.
- Catalog of Co-mutation Pairs: Systematically catalogs somatic mutation pairs with associated characteristics and contextual information for each co-mutation event.
- Centralized Co-mutation Resource: Provides a dedicated, centralized repository focused specifically on cancer co-mutations to support comparative analyses across samples.
Scientific Applications:
- Tumorigenesis Research: Enables exploration of how somatic co-mutations contribute to cancer development, progression, and heterogeneity.
- Target Identification: Supports identification of mutation pairs that may drive oncogenic processes and serve as targets for therapeutic investigation.
- Biomarker Discovery: Facilitates discovery of co-occurrence patterns that can serve as biomarkers for specific cancer types or subtypes.
Methodology:
Integration of multi-omics data and systematic cataloging of somatic mutation pairs across diverse cancer samples with associated characteristics and context.
Topics
Details
- License:
- Not licensed
- Tool Type:
- web application
- Operating Systems:
- Mac, Linux, Windows
- Programming Languages:
- JavaScript, PHP
- Added:
- 1/27/2023
- Last Updated:
- 11/24/2024
Operations
Publications
Jiang L, Yu H, Tang J, Guo Y. CoMutDB: the landscape of somatic mutation co-occurrence in cancers. Bioinformatics. 2022;39(1). doi:10.1093/bioinformatics/btac725. PMID:36355452. PMCID:PMC9805589.