CoRC

CoRC provides a high-level R API to COPASI (Complex Pathway Simulator) that enables scripting and automation of systems biology workflows for simulation and analysis of biochemical networks.

Key Features:

• High-Level R API: Exposes COPASI modeling and analysis functions as R functions to enable script-based construction of workflows.
• Reproducible Workflow Support: Enables reproducible scripting of COPASI workflows within R.
• Integration with the R Ecosystem: Interoperates with R packages and analytical tools to extend analysis of simulation results.
• Access to COPASI Analytical Toolset: Leverages COPASI's simulation and analysis capabilities from within R.

Scientific Applications:

• Modeling Biochemical Networks: Supports scripting and simulation of biochemical reaction network models using COPASI via R.
• Simulation-Based Data Analysis: Facilitates integration of COPASI simulations with R-based analyses of complex biological data.

Methodology:

Provides a scripting interface that maps COPASI functions to R and extends COPASI functionality through R's computational capabilities.