YASS

YASS is a program designed to enhance the sensitivity of DNA similarity searches. It utilizes an indexing approach and is available as a web interface and command-line tool.

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Topics

DNA polymorphism Functional, regulatory and non-coding RNA Gene transcripts Sequence assembly Sequencing

Details

Added:: 1/14/2026
Last Updated:: 1/14/2026

Operations

Database search
Genome assembly
Local alignment
Pairwise sequence alignment
Read mapping

Publications

DOI: 10.1093/NAR/GKAE513

PMID: 38860428

PMCID: PMC11260454

Links

Other

https://bioinfo.univ-lille.fr/yass/yass.php

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