cosinor

cosinor analyzes time-distributed biological data to detect and quantify circadian (24-hour) and ultradian rhythmicity using cosinor analysis.


Key Features:

  • Period customization: Allows specification of the period length for analysis to target circadian and ultradian rhythms.
  • Numerical and graphical outputs: Produces numerical evaluations of rhythmicity and generates adjustable plots of fitted rhythms.
  • Comparative validation: Displays results comparable to Cosinor2 (identical for 24-hour analysis and matching for ultradian variability) and shows slight differences versus Chronos-Fit for ultradian analyses.
  • Acrophase units: Reports acrophase in decimal time units rather than radians as used by Cosinor2.

Scientific Applications:

  • Chronobiology: Detects and quantifies circadian and ultradian patterns in biological time-series data to support chronobiology research.
  • Physiological and pathological assessment: Assesses temporal patterns that may indicate underlying physiological processes or pathologies.
  • Preliminary screening: Serves as an initial screening method to determine whether datasets exhibit significant periodicity warranting more detailed cosinor analyses.

Methodology:

Performs cosinor analysis using a user-specified period length and outputs numerical rhythm parameters and fitted plots.

Topics

Details

Tool Type:
library
Programming Languages:
R, PHP, MATLAB, SQL
Added:
1/9/2020
Last Updated:
12/19/2020

Operations

Publications

Molcan L. Time distributed data analysis by Cosinor.Online application. Unknown Journal. 2019. doi:10.1101/805960.

Links