CoverM

Read coverage calculator for metagenomics

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Topics

Metagenomics Sequence analysis

Details

License:: GPL-3.0
Maturity:: Emerging
Cost:: Free of charge
Tool Type:: command-line tool
Operating Systems:: Mac, Linux
Programming Languages:: Other
Added:: 9/22/2021
Last Updated:: 11/6/2024

Operations

Local alignment

Publications

Aroney STN, Newell RJP, Nissen J, Camargo AP, Tyson GW, Woodcroft BJ. CoverM: Read coverage calculator for metagenomics [Internet]. Zenodo; 2024. Available from: https://zenodo.org/doi/10.5281/zenodo.10531254

DOI: 10.5281/zenodo.10531254

Documentation

General

https://github.com/wwood/CoverM/blob/main/README.md

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