CyberSco
CyberSco performs automated, event-driven timelapse fluorescence microscopy by integrating real-time image analysis and unsupervised decision-making to adapt imaging parameters and device status for quantitative cell biology experiments.
Key Features:
- Real-time image analysis: Performs live analysis of fluorescence images to inform acquisition decisions during experiments.
- Unsupervised decision-making: Implements unsupervised decision-making algorithms that trigger autonomous changes in acquisition behavior.
- Conditional/event-based acquisition: Automates acquisition by applying user-defined conditions that modify imaging parameters or device status when met.
- Instrument integration: Integrates image analysis with microscope control to convert microscopes into responsive measurement devices.
- Support for timelapse experiments: Provides tunability and flexibility for a wide range of fluorescence timelapse microscopy experiments.
Scientific Applications:
- Quantitative cell biology timelapse studies: Enhances the informativeness and efficiency of quantitative timelapse fluorescence microscopy experiments.
- Dynamic cellular process monitoring: Enables adaptive imaging conditions in real time to study dynamic cellular events and responses.
- Model organism experimentation: Has been demonstrated as a proof of principle in budding yeast experiments.
Methodology:
Combines advanced image processing techniques and real-time fluorescence image analysis with automation protocols and unsupervised decision-making algorithms to adapt acquisition parameters and device status as new data are acquired.
Topics
Details
- License:
- CC-BY-NC-SA-4.0
- Tool Type:
- desktop application
- Programming Languages:
- JavaScript, Python, C++
- Added:
- 10/3/2022
- Last Updated:
- 11/24/2024
Operations
Publications
Chiron L, Le Bec M, Cordier C, Pouzet S, Milunov D, Banderas A, Di Meglio J, Sorre B, Hersen P. CyberSco.Py an open-source software for event-based, conditional microscopy. Scientific Reports. 2022;12(1). doi:10.1038/s41598-022-15207-5. PMID:35803978. PMCID:PMC9270370.