DASty
DASty visualizes and integrates protein sequence feature annotations using the Distributed Annotation System (DAS) to provide access to UniProt sequences and InterPro-derived cross-references.
Key Features:
- DAS Reference Server: Delivers sequence information and annotations sourced from UniProt and integrates feature links and database cross-references from InterPro.
- DAS Client: Implements a client using Java and Macromedia Flash to display protein sequence features retrieved via DAS.
Scientific Applications:
- Protein Feature Visualization: Provides visual representation of motifs, domains, and other sequence features to support analysis of protein structure and function.
- Data Integration and Cross-referencing: Combines annotations from UniProt and InterPro to support comparative annotation and cross-database reference mapping.
Methodology:
DASty leverages the Distributed Annotation System (DAS) framework to enable distributed retrieval of annotations via a DAS reference server and a client implemented in Java and Macromedia Flash.
Topics
Collections
Details
- Tool Type:
- web application
- Operating Systems:
- Linux, Windows, Mac
- Added:
- 1/29/2015
- Last Updated:
- 11/25/2024
Operations
Data Inputs & Outputs
Sequence visualisation
Inputs
Outputs
Publications
Jones P, Vinod N, Down T, Hackmann A, Kahari A, Kretschmann E, Quinn A, Wieser D, Hermjakob H, Apweiler R. Dasty and UniProt DAS: a perfect pair for protein feature visualization. Bioinformatics. 2005;21(14):3198-3199. doi:10.1093/bioinformatics/bti506. PMID:15905273.
PMID: 15905273
Documentation
Terms of use
http://www.ebi.ac.uk/about/terms-of-useLinks
Helpdesk
http://www.ebi.ac.uk/support/