DBCP

DBCP predicts disulfide bond connectivity patterns in proteins without requiring prior knowledge of cysteine bonding states, enabling analysis relevant to protein folding and structural studies.


Key Features:

  • No Prior Knowledge Required: Predicts disulfide connectivity without requiring prior information on cysteine bonding states.
  • Improved Accuracy: Employs a methodology that increases accuracy of disulfide connectivity predictions and reports performance as Q(p), improving on earlier published results.

Scientific Applications:

  • Protein Structure Prediction: Maps disulfide bonds to support modeling and interpretation of protein tertiary structures.
  • Structural Biology Research: Provides predicted disulfide connectivity to inform studies of protein folding mechanisms and stability.
  • Drug Design and Development: Informs design of therapeutic proteins and peptides where correct disulfide bonding is critical for function.

Methodology:

Predicts disulfide connectivity patterns using a computational prediction methodology and reports prediction accuracy as Q(p).

Topics

Details

Tool Type:
web application
Added:
2/14/2017
Last Updated:
11/25/2024

Operations

Publications

Lin H, Tseng L. DBCP: a web server for disulfide bonding connectivity pattern prediction without the prior knowledge of the bonding state of cysteines. Nucleic Acids Research. 2010;38(suppl_2):W503-W507. doi:10.1093/nar/gkq514. PMID:20530534. PMCID:PMC2896133.