dbEST database of EST sequences

Division of GenBank that contains sequence data and other information on "single-pass" cDNA sequences, or "Expressed Sequence Tags", from a number of organisms.

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Topics

Gene transcripts

Collections

DRCAT

Details

Tool Type:: web application
Operating Systems:: Linux, Windows, Mac
Added:: 9/11/2015
Last Updated:: 11/24/2024

Operations

Query and retrieval
Query and retrieval
Query and retrieval
Query and retrieval
Query and retrieval
Query and retrieval
Query and retrieval
Query and retrieval
Query and retrieval
Query and retrieval

Data Inputs & Outputs

Query and retrieval

Inputs

Gene ID
- Textual format

Outputs

Heat map
- TSV
Gene transcript report
- TSV

Query and retrieval

Inputs

Data
- BAM
- SAM

Outputs

Data
- TSV

Query and retrieval

Inputs

Data
- GFF
- GTF

Outputs

Data
- TSV

Other operations do not define inputs or outputs.

Publications

Boguski MS, Lowe TM, Tolstoshev CM. dbEST — database for “expressed sequence tags”. Nature Genetics. 1993;4(4):332-333. doi:10.1038/ng0893-332. PMID:8401577.

DOI: 10.1038/ng0893-332

PMID: 8401577

Documentation

General

https://www.ncbi.nlm.nih.gov/dbEST/

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