DBLiPro
DBLiPro provides an integrated knowledgebase and analysis platform for human lipid metabolism by combining curated lipid-associated proteins and lipid metabolites with multi-omics integration for lipidomics, transcriptomics, and proteomics analyses.
Key Features:
- Extensive Knowledgebase: Hosts 3,109 lipid-associated proteins (LAPs) and 2,098 lipid metabolites curated from UniProt, the Kyoto Encyclopedia of Genes and Genomes (KEGG), RaftProt, and PubChem.
- Interactive Bioinformatics Workflow: Provides an interactive, step-by-step workflow for integrative analysis of lipidomics, transcriptomics, proteomics, and multi-omics datasets focused on human lipid metabolism.
- Multi-Omics Integration: Supports integration of lipidomics, transcriptomics, and proteomics data to analyze lipid–protein interactions and their functional mechanisms.
Scientific Applications:
- Discovery of key molecules: Identify critical lipid-associated proteins and lipid metabolites involved in human lipid metabolic pathways.
- Mechanistic investigation: Investigate molecular mechanisms of lipid–protein interactions through integrated omics analyses.
- Biomarker and target identification: Prioritize potential biomarkers, therapeutic targets, and metabolic pathways relevant to lipid-related diseases.
Methodology:
Curates entries from UniProt, KEGG, RaftProt, and PubChem and performs integrative analysis of lipidomics, transcriptomics, and proteomics datasets via an interactive workflow.
Topics
Details
- Cost:
- Free of charge
- Tool Type:
- web application
- Operating Systems:
- Mac, Linux, Windows
- Added:
- 3/22/2024
- Last Updated:
- 3/22/2024
Operations
Publications
Wu Q, Huang Y, Kong X, Jia B, Lu X, Chen Y, Huang Z, Li Y, Dai W. DBLiPro: A Database for Lipids and Proteins in Human Lipid Metabolism. Phenomics. 2023;3(4):350-359. doi:10.1007/s43657-023-00099-w. PMID:37589022. PMCID:PMC10425311.
PMID: 37589022
PMCID: PMC10425311
Funding: - National Natural Science Foundation of China: 32000472, 32100531
- NHC Key Lab of Reproduction Regulation: CX2022-02
- Shanghai Academy of Science&Technology: SKY2022003