DCP
DCP automates construction of anatomical brain networks from diffusion tensor imaging (DTI) data to enable structural connectome analysis.
Key Features:
- Automated Multi-subject Processing: Automates construction of DTI-derived brain networks across multiple subjects and supports datasets in DICOM and NIfTI formats.
- Integration with Post-processing Packages: Integrates modules from Diffusion Toolkit, DiffusionKit, SPM, and MRIcron for DTI post-processing and network generation.
- Comprehensive Workflow: Implements the end-to-end steps required to construct anatomical connectivity patterns from initial data handling through final network generation.
- Quality Control Output: Produces per-subject folders containing quality control metrics and registration results for verification of processing outcomes.
- MATLAB-based Implementation: Provides a MATLAB-based pipeline with compatibility for Windows operating systems.
Scientific Applications:
- Structural Connectomics: Generation of DTI-derived structural connectomes and anatomical connectivity patterns for network analysis.
- Neuroscience Research: Quantitative description of anatomical connectivity to support studies of brain structure–function relationships.
- Neurological Disorder Studies: Comparative analysis of connectivity alterations in neurological and psychiatric disorders.
- Developmental and Aging Studies: Investigation of developmental changes and aging-related alterations in brain connectivity.
Methodology:
MATLAB-based pipeline that integrates Diffusion Toolkit, DiffusionKit, SPM, and MRIcron to process DTI datasets in DICOM or NIfTI formats and produce anatomical connectivity networks along with quality-control metrics and registration results.
Topics
Details
- Tool Type:
- command-line tool
- Programming Languages:
- MATLAB
- Added:
- 1/18/2021
- Last Updated:
- 2/22/2021
Operations
Publications
Huang W, Shu N. DCP: a pipeline toolbox for diffusion connectome. Unknown Journal. 2020. doi:10.1101/2020.04.16.044453.