DeathDomain
DeathDomain compiles and curates protein–protein interactions within the death domain (DD) superfamily to support analysis of signaling pathways involved in apoptosis, inflammation, necrosis, and immune cell signaling.
Key Features:
- Curated Protein–Protein Interaction Dataset: Contains 175 protein–protein interaction pairs among 99 death domain superfamily proteins curated from 295 peer-reviewed studies.
- Death Domain Superfamily Coverage: Catalogs interactions among proteins belonging to the death domain (DD) superfamily involved in cell signaling processes.
- Literature-Derived Annotations: Provides detailed annotations including experimental resources, analytical methods, and domain structure information associated with each protein–protein interaction.
Scientific Applications:
- Apoptosis Signaling Research: Supports investigation of protein interaction networks regulating programmed cell death.
- Inflammation and Immune Signaling Studies: Enables analysis of signaling pathways mediated by death domain superfamily proteins.
- Disease Mechanism Analysis: Facilitates exploration of molecular interactions associated with cancers, neurodegenerative disorders, and immune-related diseases.
Methodology:
DeathDomain integrates protein–protein interaction data for death domain superfamily proteins through manual curation of peer-reviewed literature and annotates interactions with associated experimental and structural information.
Topics
Details
- Tool Type:
- web application
- Operating Systems:
- Linux, Windows, Mac
- Programming Languages:
- JavaScript, Ruby
- Added:
- 3/30/2017
- Last Updated:
- 12/10/2018
Operations
Publications
Kwon D, et al. A comprehensive manually curated protein-protein interaction database for the Death Domain superfamily. Nucleic Acids Res. 2012; 40:D331-6. doi: 10.1093/nar/gkr1149
PMID: 22135292