decision-tree

decision-tree implements a decision-tree methodology that classifies WHO categories of B-cell chronic lymphoproliferative disorders using multiparametric flow cytometry immunophenotypic data.


Key Features:

  • Decision-Tree Structure: Employs a decision tree composed of logistic function nodes that branch into sets representing potential distinct diagnoses.
  • Input Data: Processes multiparametric flow cytometry data from peripheral blood and bone marrow for immunophenotypic characterization.
  • Regularization (Lasso): Applies Lasso regularization to logistic nodes to mitigate overfitting and enhance model generalizability.
  • Transparent Binary Nodes: Uses up to seven binary transparent decision nodes to provide interpretable diagnostic pathways.
  • Validation and Performance: Validated on diagnostic samples from 283 patients with mature lymphoid leukemias/lymphomas, achieving 95% correctness in cross-validation and 100% in the training sample, with single diagnoses for 61% and multiple possible diagnoses for 34% of cases.

Scientific Applications:

  • Differential Diagnosis: Distinguishes between WHO categories of B-cell chronic lymphoproliferative disorders based on flow cytometry immunophenotypes.
  • Research and Development: Provides a validated computational framework to support research into leukemia and lymphoma diagnostic criteria and therapeutic strategies.

Methodology:

Constructs a decision tree of logistic regression nodes with Lasso regularization and up to seven binary decision nodes.

Topics

Details

Programming Languages:
MATLAB
Added:
11/14/2019
Last Updated:
12/17/2020

Operations

Publications

Moraes L, Pedreira C, Barrena S, Lopez A, Orfao A. A decision-tree approach for the differential diagnosis of chronic lymphoid leukemias and peripheral B-cell lymphomas. Computer Methods and Programs in Biomedicine. 2019;178:85-90. doi:10.1016/j.cmpb.2019.06.014. PMID:31416565.

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