DeepReac+
DeepReac+ predicts chemical reaction outcomes and identifies optimal reaction conditions by combining a graph-neural-network-based model (DeepReac) with deep active learning applied to 2D molecular structures.
Key Features:
- Graph-neural-network model (DeepReac): The DeepReac architecture directly processes 2D molecular structures to generate representations for reaction prediction.
- Deep active learning strategies: Integrates active learning to select informative data points and reduce the number of experiments and labeled examples required for training.
- Universality across tasks: Adapts to various prediction tasks without extensive model reconfiguration by using 2D structural inputs.
- Outcome prediction and condition optimization: Produces predictions of chemical reaction outcomes and assists in identifying optimal reaction conditions.
- Demonstrated performance: Achieves state-of-the-art results with minimal labeled data across three diverse chemical reaction datasets in multiple scenarios.
Scientific Applications:
- Reaction outcome prediction: Predicting chemical reaction outcomes from 2D molecular inputs.
- Reaction-condition optimization: Guiding selection of optimal reaction conditions while minimizing experimental runs through active learning.
- Low-data reaction modeling: Enabling accurate modeling and prediction of reactions with minimal labeled experimental data.
- AI-aided chemical synthesis: Assisting exploration and optimization of complex chemical reactions using machine-learned models and active learning.
Methodology:
Employs a graph-neural-network-based model (DeepReac) that directly processes 2D molecular structures and integrates deep active learning strategies to select informative data points and reduce required labeled experiments; validated on three diverse chemical reaction datasets.
Topics
Details
- License:
- Apache-2.0
- Cost:
- Free of charge
- Tool Type:
- workflow
- Operating Systems:
- Mac, Linux, Windows
- Programming Languages:
- Python
- Added:
- 6/7/2022
- Last Updated:
- 6/7/2022
Operations
Publications
Gong Y, Xue D, Chuai G, Yu J, Liu Q. DeepReac+: deep active learning for quantitative modeling of organic chemical reactions. Chemical Science. 2021;12(43):14459-14472. doi:10.1039/d1sc02087k. PMID:34880997. PMCID:PMC8580052.