DelFTa

DelFTa predicts electronic properties of drug-like molecules by using Δ-machine-learning with three-dimensional message-passing neural networks to approximate density functional theory (DFT) quantum-mechanical observables from semiempirical baselines at reduced computational cost.


Key Features:

  • Δ-Machine Learning Approach: Uses Δ-learning to correct errors between semiempirical baseline calculations and target DFT-level properties.
  • Three-Dimensional Message-Passing Neural Networks: Employs three-dimensional message-passing neural networks trained on large datasets of quantum-mechanical properties to model spatially resolved electronic structure.
  • Wide Array of Quantum Observables: Predicts quantum observables at molecular, atomic, and bond levels, providing approximations to DFT-derived values.
  • Extrapolation Capabilities: Enables extrapolation of non-covalent intra- and intermolecular interactions to larger biomolecular systems.
  • DFT Approximation at Reduced Cost: Produces DFT-approximate electronic properties with substantially lower computational cost than full DFT calculations by leveraging semiempirical baselines and error-correction.

Scientific Applications:

  • Large-scale quantum chemistry: Enables large-scale prediction of quantum-chemical properties that are otherwise computationally prohibitive with full DFT.
  • Drug discovery and molecular design: Supports design and optimization of drug-like molecules by providing rapid DFT-approximate electronic properties for screening and lead optimization.
  • Non-covalent interaction analysis: Facilitates assessment of intra- and intermolecular non-covalent interactions in larger biomolecular systems.

Methodology:

Three-dimensional message-passing neural networks are trained on large datasets of quantum-mechanical properties, and a Δ-learning framework corrects errors from semiempirical baseline calculations to approximate DFT-level properties.

Topics

Details

License:
AGPL-3.0
Cost:
Free of charge
Tool Type:
workflow
Operating Systems:
Mac
Programming Languages:
Python
Added:
7/20/2022
Last Updated:
11/24/2024

Operations

Publications

Atz K, Isert C, Böcker MNA, Jiménez-Luna J, Schneider G. Δ-Quantum machine-learning for medicinal chemistry. Physical Chemistry Chemical Physics. 2022;24(18):10775-10783. doi:10.1039/d2cp00834c. PMID:35470831. PMCID:PMC9093086.

PMID: 35470831
PMCID: PMC9093086
Funding: - Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung: 205321_182176