digilogger
digilogger analyzes fluorescence data from point-of-care testing (POCT) microfluidic microbead chip experiments to detect and quantify DNA and protein biomarkers for cardiovascular and outbreak-related monitoring.
Key Features:
- Simultaneous Detection and Quantification: Supports concurrent assessment of multiple biomarkers, including cell-free mitochondrial DNA (cfmDNA) and proteins such as C-reactive protein (CRP), brain natriuretic peptide (BNP), and low-density lipoprotein (LDL).
- Microfluidic Technology Integration: Operates with a microfluidic platform that uses 11–15 μm, dual-color encoded microbeads to immobilize biomarkers as planar layers within a flow cell for fluorescence measurements.
- Automated Fluorescence Analysis: Compatible with an in-house fully automated fluorescence microscope for end-point and real-time analysis of binding events between target molecules and microbeads, with reported optimization reducing detection limits by at least fivefold per biomarker.
- Rapid Data Processing: Enables rapid kinetic data inspection, reaching nearly 50% of fluorescence intensity within 7 minutes during kinetic experiments to support timely quantitative assessment.
Scientific Applications:
- Cardiovascular Disease Monitoring: Supports detection and quantification of biomarkers relevant to cardiovascular disease for diagnosis and monitoring studies.
- Disease Outbreak Detection: Facilitates rapid multi-biomarker assessment useful for identifying and tracking disease outbreaks.
Methodology:
Processes fluorescence microscopy end-point images and time-series from microbead-based microfluidic assays to provide visualization, kinetic analysis, and quantitative interpretation of binding events.
Topics
Details
- License:
- MIT
- Tool Type:
- desktop application
- Programming Languages:
- R
- Added:
- 1/14/2020
- Last Updated:
- 12/22/2020
Operations
Publications
Dinter F, Burdukiewicz M, Schierack P, Lehmann W, Nestler J, Dame G, Rödiger S. Simultaneous detection and quantification of DNA and protein biomarkers in spectrum of cardiovascular diseases in a microfluidic microbead chip. Analytical and Bioanalytical Chemistry. 2019;411(29):7725-7735. doi:10.1007/s00216-019-02199-x. PMID:31760445. PMCID:PMC6881413.