DLEB

DLEB provides deep learning model design, recommendation, data pre-processing, and automatic generation of executable Python code to support analysis and modeling of biological data.


Key Features:

  • Model Design and Code Generation: Provides model design capabilities and automatically generates executable Python code corresponding to designed deep learning models.
  • Recommendation System: Recommends appropriate deep learning models based on specific learning tasks and data types.
  • Data Pre-processing Tools: Provides tools for pre-processing input biological data to prepare datasets for model training and analysis.
  • Template Models and Example Datasets: Includes template deep learning models and example biological datasets for training and experimentation.

Scientific Applications:

  • Genomic analysis: Applies deep learning approaches to genomic data analysis.
  • Protein structure prediction: Applies deep learning approaches to protein structure prediction.
  • Disease modeling: Applies deep learning approaches to disease modeling.
  • Drug discovery: Applies deep learning approaches to drug discovery.

Methodology:

Model design, automatic generation of executable Python code, recommendation of models based on learning tasks and data types, data pre-processing, and provision of template models and example biological datasets.

Topics

Details

License:
Not licensed
Cost:
Free of charge
Tool Type:
web application
Operating Systems:
Mac, Linux, Windows
Programming Languages:
Python
Added:
8/19/2022
Last Updated:
11/24/2024

Operations

Publications

Wy S, Kwon D, Kwon K, Kim J. DLEB: a web application for building deep learning models in biological research. Nucleic Acids Research. 2022;50(W1):W254-W260. doi:10.1093/nar/gkac369. PMID:35552439. PMCID:PMC9252827.

PMID: 35552439
PMCID: PMC9252827
Funding: - Ministry of Science and ICT, Republic of Korea: 2014M3C9A3063544, 2019R1F1A1042018, 2021M3H9A2097134