DLEB
DLEB provides deep learning model design, recommendation, data pre-processing, and automatic generation of executable Python code to support analysis and modeling of biological data.
Key Features:
- Model Design and Code Generation: Provides model design capabilities and automatically generates executable Python code corresponding to designed deep learning models.
- Recommendation System: Recommends appropriate deep learning models based on specific learning tasks and data types.
- Data Pre-processing Tools: Provides tools for pre-processing input biological data to prepare datasets for model training and analysis.
- Template Models and Example Datasets: Includes template deep learning models and example biological datasets for training and experimentation.
Scientific Applications:
- Genomic analysis: Applies deep learning approaches to genomic data analysis.
- Protein structure prediction: Applies deep learning approaches to protein structure prediction.
- Disease modeling: Applies deep learning approaches to disease modeling.
- Drug discovery: Applies deep learning approaches to drug discovery.
Methodology:
Model design, automatic generation of executable Python code, recommendation of models based on learning tasks and data types, data pre-processing, and provision of template models and example biological datasets.
Topics
Details
- License:
- Not licensed
- Cost:
- Free of charge
- Tool Type:
- web application
- Operating Systems:
- Mac, Linux, Windows
- Programming Languages:
- Python
- Added:
- 8/19/2022
- Last Updated:
- 11/24/2024
Operations
Publications
Wy S, Kwon D, Kwon K, Kim J. DLEB: a web application for building deep learning models in biological research. Nucleic Acids Research. 2022;50(W1):W254-W260. doi:10.1093/nar/gkac369. PMID:35552439. PMCID:PMC9252827.
DOI: 10.1093/nar/gkac369
PMID: 35552439
PMCID: PMC9252827
Funding: - Ministry of Science and ICT, Republic of Korea: 2014M3C9A3063544, 2019R1F1A1042018, 2021M3H9A2097134